BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017D02LP1|AL427148
(1013 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1283 1252 0.0
>3x_Contig1283
Length = 6261
Score = 1252 bits (631), Expect = 0.0
Identities = 632/633 (99%)
Strand = Plus / Minus
Query: 1 gatcctattcaatgggatcggtctgawctgagggaacttatgttcggagtagttttcatt 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 633 gatcctattcaatgggatcggtctgatctgagggaacttatgttcggagtagttttcatt 574
Query: 61 catggaacagatctcttccctggttggtgtacccaaaactttaataatttcaaccaattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 catggaacagatctcttccctggttggtgtacccaaaactttaataatttcaaccaattg 514
Query: 121 atcgatcttagattcaccagggaaaatgggttgtcctaatagcagttcagccataacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atcgatcttagattcaccagggaaaatgggttgtcctaatagcagttcagccataacaca 454
Query: 181 acctgcagaccaaatatcaatctttgttgtgtaattggtagcaccaaagatcaactctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 acctgcagaccaaatatcaatctttgttgtgtaattggtagcaccaaagatcaactctgg 394
Query: 241 ggctctgtagtaacgggagcaaatatatgacacattgggctcgtttggtttcaactgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggctctgtagtaacgggagcaaatatatgacacattgggctcgtttggtttcaactgttt 334
Query: 301 agcagaccccaaatcacagattttcaacagtaaagtatctggatccaccaaaatattctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 agcagaccccaaatcacagattttcaacagtaaagtatctggatccaccaaaatattctg 274
Query: 361 tggtttgatgtctctatggcagacattgaccacttgatgcaaatagtttaaagatttgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tggtttgatgtctctatggcagacattgaccacttgatgcaaatagtttaaagatttgaa 214
Query: 421 caattggaacatgtaaatcttgatttcgtaacgatccattggttgatgcaaggaaatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 caattggaacatgtaaatcttgatttcgtaacgatccattggttgatgcaaggaaatgaa 154
Query: 481 ctctttgagccgttgataaagagacatgggcatgtaatctacaatcaaatttagataaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ctctttgagccgttgataaagagacatgggcatgtaatctacaatcaaatttagataaag 94
Query: 541 ttcttggtccgattgttcaaggaaatagtacttcaaatcgatcaaattcggatgactgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ttcttggtccgattgttcaaggaaatagtacttcaaatcgatcaaattcggatgactgat 34
Query: 601 caatttcatgatctccagttctctattcttaaa 633
|||||||||||||||||||||||||||||||||
Sbjct: 33 caatttcatgatctccagttctctattcttaaa 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8617
Number of Sequences: 1807
Number of extensions: 8617
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 1013
length of database: 10,358,551
effective HSP length: 16
effective length of query: 997
effective length of database: 10,329,639
effective search space: 10298650083
effective search space used: 10298650083
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)